I. English Papers

2008 Sasaki, H., A. Tanaka, M. Iwataki, Y. Touke, E. Siswanto, C.K. Tan and J. Ishizaka (2008) Optical properties of the red tide in Isahaya Bay, southwestern Japan: Influence of chlorophyll a concentration, J. Oceanogr. 65: 511-523.

2008 Sasaki, H., E. Siswanto, K. Nishiuchi, K. Tanaka, T. Hasegawa and J. Ishizaka (2008), Mapping the low salinity Changjiang Diluted Water using satellite-retrieved colored dissolved organic matter (CDOM) in the East China Sea during high river flow season, Geophys. Res. Lett., 35, L04604, doi: 10.1029/2007GL032637.

2007 Ozawa, M., A. Yamaguchi, T. Ikeda, Y. Watanabe & J. Ishizaka (2007) Abundance and community structure of chaetognaths from the epipelagic through abyssopelagic zones in the western North Pacific and its adjacent seas, Plankton & Benthos Research 2(4), 184-197..

2007 Suzuki, T., H. Mori, J. Ishizaka and K. Katayama (2007) Biomass and distribution of filamentous cyanobacteria, Trichodesmium spp., in spring in the East China Sea. Plankton Benthos Res., 2, 175-183.

2007 Tan, C.K., J. Ishizaka, A. Manda, E. Siswanto and S.C. Tripathy, (2007) Assessing post tsunami effects on ocean color at eastern Indian Ocean using MODIS Aqua satellite, Int. J. Remote Sensing., 28, 3055-3069.

2007 Ishizaka, J., E. Siswanto, T. Itoh, H. Murakami, Y. Yamaguchi, T. Ishimaru, S. Hashimoto and T. Saino (2007): Verification of Vertically Generalized Production Model and Estimation of Primary Production in the Sagami Bay, Japan. J. Oceanogr., 64, 5１７-524.

2007 Siswanto, E., J. Ishizaka, K. Yokouchi, K. Tanaka, C.K. Tan (2007) Estimation of Interannual and Interdecadal Variations of Typhoon-Induced Primary Production: A Case Study for the Outer Shelf of the East China Sea, Geophysic. Res. Lett. 34, L03604, doi:10.1029/2006GL028368.

2006 Arao, K., J. Ishizaka, N. Sugimoto, I. Matsui, A. Shimizu, I. Mori, M. Nishikawa, K. Aoki, A. Uchiyama, A. Yamazaki, H. Togawa, and J. Asano (2006) Yellow Sand Dust Event on 13 April 2003 over Western Kyushu, Japan, SOLA, 2, 100‒103, doi:10.2151/sola.2006-026.

2006 Tanaka, A. H. Sasaki and J. Ishizaka (2006) Alternative measuring method for water-leaving radiance using a radiance sensor with a domed cover. Optics Express. 14, 3099-3105.

2006 Siswanto, E., J. Ishizaka and K. Yokouchi (2006) Optimal primary production model and parameterization in the eastern East China Sea. J. Oceanogr. 62, 361-372.

2006 Murakami, H., K. Sasaoka, K. Hosoda, H. Fukushima, M. Toratani, R. Frouin, B. G. Mitchell, M. Kahru, P.-Y. Deschamps, D. Clark, S. Flora, M. Kishino, S.-i. Saitoh, I. Asanuma, A. Tanaka, H. Sasaki, K. Yokouchi, Y. Kiyomoto, H. Saito, C. Dupouy, A. Siripong, S. Matsumura, and J. Ishizaka (2006): Validation of ADEOS-II GLI ocean color products using in-situ observations. J. Oceanogr., 62, 373-393.

2006 Watanabe, Y., A. Yamaguchi, H. Ishida, T. Harimoto, S. Suzuki, Y. Sekido, T. Ikeda, Y. Shirayama, M.M. Takahashi, T. Ohsumi, J. Ishizaka (2006) Lethality of increasing CO2 levels on deep-sea copepods in the western North Pacific. J. Oceanogr. 62, 185-196.

2006 Carr, M. E., M.A.M. Fredrichs, M. Schmeltz, M.N. Aita, D. Antoine, K.R. Arrigo, I. Asanuma, O. Aumont, R. Barber, M. Behrefeld, R. Bidigare, E. Buitenhuis, J. Campbell, A. Ciotti, H. Dierssen, M. Dowell, J. Dunne, W. Esaias, B. Gentili, S. Groom, N. Hoepffner, J. Ishizaka, T. Kameda, C. LeQuere, S. Lohrenz, J. Marra, F. Melin, K. Moore, A. Morel, T. Reddy, J. Ryan, M. Scardi, T. Smyth, K. Turpie, G. Tilstone, K. Waters, Y. Yamanaka (2006): A comparison of global estimates of marine primary production from ocean color. Deep-Sea Res. II, 53, 741-770 http://dx.doi.org/10.1016/j.dsr2.2006.01.028.

2006 Ishizaka, J., Y. Kitaura, Y. Touke, H. Sasaki, A. Tanaka, H. Murakami, T. Suzuki, K. Matsuoka, H. Nakata: Satellite Detection of Red Tide in Ariake Sound, 1998-2001. J. Oceanogr. 62:37-45.

2006 Yamada, K. and J. Ishizaka: Estimation of Interdecadal Change of Spring Bloom Timing; in the Case of the Japan Sea, Geophysc. Res. Let. 33, L02608, doi:10.1029/2005GL024792.

2006 Tan, C. K., J. Ishizaka, S. Matsumura, F. M. Yusoff and M. I. H. Ibrahim: Seasonal variability of SeaWiFS chlorophyll a in the Maraca Straits in relation to Asain monsoon. Cont. Shelf Res. 26: 168-178.

2005 Kishino, M. A. Tanaka, and J. Ishizaka: Retrieval of chlorophyll a, suspended solids, and colored dissolved organic matter in Tokyo Bay using ASTER data, Remote Sens. Env., 99, 66-74.

2005 Sato, T., Y. Watanabe, K. Toyota and J. Ishizaka: Extended probit mortality model for zooplankton against transient change of PCO2. Mar. Pollution Bullein 50: 975-979.

2005 Sasaki, H., T. Miyamura, S.-i. Saitoh and J. Ishizaka. Seasonal variation of absorption by particles and colored dissolved organic matter (CDOM) in Funka Bay, southwestern Hokkaido, Japan. Est. Coast. Shelf Sci. 64: 447-458.

2005 Yamada, K., J. Ishizaka and H. Nagata. Spatial and temporal variability of satellite estimated primary production in the Japan Sea from 1998 to 2002. J. Oceanogr. 61: 857-869.

2005 Kameda, T. and J. Ishizaka. Size-fractionated primary production estimated by a two-phytoplankton community model applicable to ocean color remote sensing. J. Oceanogr. 61: 663-672.

2005 Siswanto, E., J. Ishizaka, K. Yokouchi, Estimation of Chlorophyll Vertical Profiles from Satellite Data and the Implication to Primary Production in Kuroshio Front of the East China Sea. J. Oceanogr., 61, 575-589.

2005 Yamaguchi, A., Y. Watanabe, H. Ishida, T. Harimoto, M. Maeda, J. Ishizaka, T. Ikeda, M.M. Takahashi: Biomass and chemical composition of net-plankton down to greater depth (0-5800m) in the western North Pacific Ocean. Deep-Sea Res. I, 52, 341-353

.2004 Suh, Y.-S., L.-H. Jang, N.-K. Lee, J. Ishizaka: Feasibility of red tide detection around Korean waters using satellite remote sensing, J. Fish. Sci. Tech. 7, 148-162.

2004 Yamada, K., J. Ishizaka, S. Yoo, H. Kim and S. Chiba: Seasonal and Interannual Variability of Sea Surface Chlorophyll a Concentration in the Japan/East Sea (JES). Prog. Oceanogr. 61, 193-211.

2004 Yamaguchi, A., T. Ikeda, Y. Watanabe and J. Ishizaka: Vertical Distribution Patterns of Pelagic Copepods as Viewed from the Predation Pressure Hypothesis. Zoological Studies 43: 475-485.

2004 Yamaguchi, A., Y. Watanabe, H. Ishida, T. Harimoto, K. Furusawa, S. Suzuki, J. Ishizaka, T. Ikeda and M. M. Takahashi: Latitudinal differences in the planktonic biomass and community structure down to the greater depths in the western North Pacific. J. Oceanogr., 60, 773-788.

2002 Yamaguchi, A., Yuji Watanabe, Hiroshi Ishida, Takashi Harimoto, Kazushi Furusawa, Shinya Suzuki, Joji Ishizaka, Tsutomu Ikeda and Masayuki Mac Takahashi Structure and size distribution of plankton communities down to the greater depths in the western North Pacific Ocean, Deep-Sea Res. Part II. 49. 5513-5529

2002 Bricaud, A., C. S. Roesler, J. S. Parslow and J. Ishizaka, Bio-optical studies during the JGOFS-equatorial Pacific program: a contribution to the knowledge of the equatorial system, Deep-Sea Res. Part II, 49 2583-2599.

2002 Yamaguchi, A., Y. Watanabe, H. Ishida, T. Harimoto, K. Furusawa, S. Suzuki, J. Ishizaka, T. Ikeda, M. M. Takahashi, Community and trophic structures of pelagic copepods down to the greater depths in the western subarctic Pacific (WEST-COSMIC). Deep-Sea Res. 49, 1007-1025.

2001 Nakamoto, S., S. P. Prasanna Kumar, J.M. Oberhuber, J. Ishizaka, K. Muneyama, and R. Frouin, Response of the equatorial Pacific to chlorophyll pigment in a mixed layer isopycnal ocean general circulation model, Geophysic. Res. Lett. 28, 2021-2024.

2000 Kim, S.-W., S. Saitoh, J. Ishizaka, Y. Isoda, and M. Kishino, Temporal and spatial variability of phytoplankton pigment concentrations in the Japan Sea derived from CZCS images. J. Oceanogr. 56, 527-538.

2000 Murakami, H., J. Ishizaka, H. Kawamura, ADEOS observations of chlorophyll a concentration, sea surface temperature, and wind stress change in the equatorial Pacific during the 1997 El Nino onset. J. Geophysic. Res., 19551-19559.

2000 Goes, J.I. , T. Saino, H. Oaku, J. Ishizaka, C．S．Wong and Y. Nojiri, Basin scale estimates of Sea Surface Nitrate and New Production from remotely sensed Sea Surface Temperature and Chlorophyll. Geophysic. Res. Let. 27, 1263-1266.

1999 Harimoto, T., J. Ishizaka, and R. Tsuda, Latitudinal and vertical distributions of phytoplankton absorption spectra in the central North Pacific during spring 1994, J. Oceanogr., 55, 667-680.

1999 Xu, Y., J. Ishizaka and S. Aoki, Simulations of the distribution of sequestered CO2 in the North Pacific using a regional general circulation model, Energy Conversion & Management, 40, 683-691.

1998 Shimada, M., H. Oaku, Y. Mitomi, H. Murakami, A. Mukaida, J. Ishizaka, H. Kawamura, T. Tanaka, M. Kishino, and H. Fukushima, Calibration and validation of the ocean color version 3 products from ADEOS OCTS. J. Oceanogr., 54, 401-416.

1998 Ishizaka, J. Spatial distribution of primary production off Sanriku, northwestern Pacific, during spring estimated by Ocean Color and Temperature Scanner (OCTS). J. Oceanogr., 54, 553-564.

1998 Saitoh, S., D. Inagake, K. Sasaoka, J. Ishizaka, Y. Nakame, and T. Saino, Satellite and ship observations of Kuroshio warm-core ring 93A off Sanriku in spring 1997. J. Oceanogr, 54, 495-508.

1997 Ishizaka, J., K. Harada, K. Ishikawa, H. Kiyosawa, H. Furusawa, Y. Watanabe, H. Ishida, K. Suzuki, N. Handa, and M. Takahashi, Size and Taxonomic Plankton Community Structure and Carbon Flow at the Equator of Central Pacific during 1990-1994. Deep-Sea Res. Part II., 44, 1927-1949.

1997 Ishizaka, J., I. Asanuma, N. Ebuchi, H. Fukushima, H. Kawamura, K. Kawasaki, M. Kishino, M. Kubota, H. Masuko, S. Matsumura, S. Saitoh, Y. Senga, M. Shimanuki, N. Tomii and M. Utashima, Time Series of Physical and Biological Parameters off Shimane, Japan, during Fall of 1993: First Observation by Moored Optical Buoy System for ADEOS Data Verification. J. Oceanogr., 53, 245-258.

1997 Kishino, M., J. Ishizaka, S. Saitoh, Y. Senga and M. Utashima, Verification plan of OCTS atmospheric correction and phytoplankton pigment by moored optical buoy system. J. Geophysic. Res., 102, 17197-17207.

1997 Suzuki, K., N. Handa, H. Kiyosawa, and J. Ishizaka, Temporal and spatial patterns of phytoplankton pigments in the central Pacific Ocean along 175｡E during the boreal summers of 1992 and 1993. J. Oceanogr., 53, 383-396.

1996 Obata, A., J. Ishizaka and M. Endoh, Global verification of critical depth theory for phytoplankton bloom with climatological in situ temperature and satellite ocean color data. J. Geophysic. Res., 101, 20657-20667.

1995 Yoshimori, A., J. Ishizaka, T. Kono, H. Kasai, H. Saito, M. J. Kishi and S. Taguchi, Modeling of spring bloom in the Western Subarctic Pacific (off Japan) with observed vertical desnsity structure. J. Oceanogr., 51, 471-488.

1995 Suzuki, K., N. Handa, H. Kiyosawa, J. Ishizaka, Distribution of the prochlorophyte Prochlorococcus in the central Pacific Ocean as measured by HPLC. Limnol. Oceanogr. 40, 983-989.

1994 Ishizaka, J., H. Kiyosawa, K. Ishida, K. Ishikawa, M. Takahashi, Meridional Distribution and Carbon Biomass of Autotrophic Picoplankton in the Central North Pacific Ocean during Late Northern Summer 1990, Deep-Sea Res., 41: 1745-1766.

1992 Ishizaka, J., H. Fukushima, M. Kishino, T. Saino, and M. Takahashi, Phytoplankton pigment distributions in regional upwelling around the Izu Peninsula detected by Coastal Zone Color Scanner on May 1982. J. Oceanogr., 48: 305-327.

1990 Ishizaka, J., Coupling of Coastal Zone Color Scanner data to a physical-biological model of southeastern U.S. continental shelf ecosystem. 1. CZCS data description and Lagrangian particle tracing experiments. J. Geophysic. Res., 95: 20167-20181.

1990 Ishizaka, J., Coupling of Coastal Zone Color Scanner data to a physical-biological model of southeastern U.S. continental shelf ecosystem. 2. An Eulerian model. J. Geophysic. Res., 95: 20183-20199.

1990 Ishizaka, J., Coupling of Coastal Zone Color Scanner data to a physical-biological model of southeastern U.S. continental shelf ecosystem. 3. Nutrient and phytoplankton fluxes and CZCS data assimilation. J. Geophysic. Res., 95: 20201-20212.

1990 McClain, C. R., J. Ishizaka, and E. E. Hofmann, Estimation of the processes controlling variability in phytoplankton pigment distributions on the southeastern U.S. continental shelf. J. Geophysic. Res., 95: 20213-20235.

1988 Ishizaka, J., M. Kaichi, and M. Takahashi, Resting spore formation of Leptocylindrus danicus during short time-scale upwelling and its significance as predicted by a simple model. Ecol. Res., 2: 229-242.

1988 Ishizaka, J., and E. E. Hofmann, Plankton dynamics on the outer southeastern U.S. continental shelf. Part I: Lagrangian particle tracing experiments. J. Mar. Res., 46: 853-882.

1987 Atkinson, L. P., J. O. Blanton, C. McClain, T. N. Lee, M. Takahashi, T. Ishimaru, and J. Ishizaka, Observations of upwelling around the Izu Peninsula, Japan 1982. J. Oceanogr. Soc. Japan, 43: 89-103.

1986 Ishizaka, J., M. Takahashi, and S. Ichimura, Changes in the growth rate of phytoplankton in a local upwelling around the Izu Peninsula, Japan. J. Plankton Res., 8: 169-181.

1986 Takahashi, M., J. Ishizaka, T. Ishimaru, L. P. Atkinson, T. N. Lee, Y. Yamaguchi, Y. Fujita, and S. Ichimura, Temporal changes of nutrient concentrations and phytoplankton biomass in a short time scale upwelling around the Izu Peninsula, Japan. J. Plankton Res., 8: 1039-1049.

1983 Ishizaka, J., M. Takahashi, and S. Ichimura, Evaluation of coastal upwelling effects on phytoplankton growth by simulated culture experiments. Mar. Biol., 76: 271-278.

II. Other English Publications

2004 Ishizaka, J., A. Wakamatsu, T. Matsuno, M. Shimizu, A. Nishina, H. Ichikawa, Y.S. Suh, Behavior of chlorophyll a patches observed by satellite and drifting buoys around Jeju Island. Proc. 2^nd symposium on PEACE..

2004 Ishizaka, J., A. Tanaka, H. Sasaki, H. Murakami, W.-Z. Chen, K. Hosoda, K. Sasaoka, I. Asanuma, H. Kawamura, M. Toratani, H. Fukushima, Early Scientific Results of GLI Ocean. Proceedings of SPIE Vo. 5234, 525-530.

2003 Ishizaka, J. Possible influence of Changjiang River dam to primary production in the East China Sea, Proc. International Symposium on Oceanographic Environmental Change after Completion of the Changjiang (Yangtze River) Three Gorges Dam，85-87

2003 Ishizaka, J., Detection of red tide events in the Ariake Sound, Japan, Proceedings of SPIE Vol. 4892, 264-268

2002 Tanaka, A., J. Ishizaka, H. Sasaki, M. Kishino, In Water Algorithm using Neural Network for GLI/ADEOS-II, Proceedings of Ocean Optics XVI. CD-ROM.

2002 Sasaki, H., A. Tanaka, J. Ishizaka, S. Saitoh Variations of Light Absorption by Colored Dissolved Organic Matter (CDOM) in Various Areas of the Western North Pacific, Proceedings of Ocean Optics XVI. CD-ROM.

2002 Ishizaka, J. H. Yamada, A. Tanaka, H. Sasaki, Y. Kiyomoto, K. Okamura, K. Yokouchi, Colored Dissolved Organic Matter in the East China Sea, Proceedings of Ocean Optics XVI. CD-ROM.

2002 Ishizaka, J. Plenary Session, Ocean Color, Proceedings of PORSEC 2002.

2002 Siswanto, E., and J. Ishizaka, Estimating chlorophyll vertical profiles around Kuroshio front of East China Sea during spring and autumn 2001. Proceedings of PORSEC 2002, 459-464.

2002 Ishizaka, J., H. Murakami, I. Asanuma, Status of GLI Ocean on ADEOS-II, Proceedings of PORSEC 2002, 475-477.

2002 Ishizaka, J., K. Katayama, H. Kaneko, T. Suzuki, T. Matsuno, Temporal and spatial variability of chlorophyll-a on the northern shelf edge of the East China Sea, Proceedings of PORSEC 2002, 85-87.

2002 Tan, C.K., H.M. Ibrahim, J. Ishizaka, F.M. Yusoff, T. Ichikawa, Verification of SeaWiFS chlorophyll a data of the Straits of Malacca with data from MASDEC cruises. In Tropical Marine Environment: Charting Strategies for the Millennium. F.M. Yusoff, M. Shariff, H.M. Ibrahim, S.G. Tan & S.Y. Tai (eds) pp. 833-848.

2001 Choi, K.-S., K.-I. Park, K.-W. Lee, Y.-B. Ko, S.-K. Yang, K. Matsuoka, J. Ishizaka, A. Tamaki, Report on the occurrence of Perkinsus, a protozoan parasite around in the Manila Clams Ruditapes philippinarum collected from the Ariake Sound, Japan. The 3^rd Int’l Symp. On Oceanography and Fisheries in the East China Sea,101-109.

2001 Ishizaka, J., K. Katayama, S. Kaneko, T. Suzuki, T. Matsuno, Variability of chlorophyll a at the shelf edge of the East China Sea during spring and fall of 1999 and 2000. The 3^rd Int’l Symp. On Oceanography and Fisheries in the East China Sea,17-22.

2000 Takahashi, M., H. Kanazawa, H. Kiyosawa and J. Ishizaka, Distribution and non-dominancy of large diatoms in planktonic algal communities in the central Pacific Ocean along 175oE. In "Dynamics and Characterization of Marine Organic Matter", Eds. N. Handa, E. Tanoue and T. Hama, TERRAPUB/Kluwer, pp67-89.

2000 Kameda, T., J. Ishizaka, H. Murakami Two-phytoplankton community of primary production for ocean color satellite data. Hyperspectral Remote Sensing of the Ocean. Proceedings of SPIE. 4154, 159-165.

2000 Ishizaka, J. Phytoplankton distribution in the East China Sea detected by Ocean Color Remote Sensing. Proc. The 5^th Int'l Symp. On Mar. Sci., Marine Environmental Study on the East China Sea and Yellow Sea.

1999 Ishizaka, J. Ocean Color Detection of Changjiang Plume in the East China Sea on 1998. Proc. of the 2^nd International Workshop on Oceanography and Fisheries in the East China Sea.

1999 Tsubota, H., J. Ishizaka, A. Nishimura, Y.W. Watanabe, Overview of NOPACCS (Northwest Pacific Carbon Cycle Study), J. Oceanogr., 55, 645-654.

1997 Ishizaka, J., M. Kishiono and H. Fukushima, Ocean Color and Temperature Sensor (OCTS) Update, Backscatter, 8, 13-15.

1996 NOPACCS HomePage, http://www.aist.go.jp/RIODB/nopaccs/

1995 Ishizaka, J., Continental shelf ecosystems. "Encyclopedia of Environmental Biology", Vol. 1, Eds. W. A. Nierenberg, E. O. Wilson, P. H. Raven and I. Karube, Academic Press, pp. 401-411.

1994 Ishizaka, J., Interannual and seasonal variability of size-fractionated chlorophyll a along 175^oE. Japanese JGOFS News Letter, No. 1, 6-7.

1993 Fukushima, H. and J. Ishizaka, Special features and applications for CZCS data in Asian waters. "Ocean Colour: Theory and Applications in a Decade of CZCS Experience", Eds., V. Barale and P.M. Schlittenhardt, Kluwer Academic, pp. 213-236.

1993 Ishizaka, J. and E.E. Hofmann, Coupling of ocean colour data to physical/biological models. "Ocean Colour: Theory and Applications in a Decade of CZCS Experience", Eds., V. Barale and P.M. Schlittenhardt, Kluwer Academic, pp. 271-288.

1993 Cullen, J.J., R.J. Geider, J. Ishizaka, D.A. Kiefer, J. Marra, E. Sakshaug, J.A. Raven, Towards a general description of phytoplankton growth for biogeochemical models, "Towards a Model of Biogeochemical Ocean Processes", Eds., G.T. Evans and M.J.R. Fasham, Springer-Verlag, pp. 153-176.

1993 Ishizaka, J., Data assimilation for biogeochemical models. "Towards a Model of Biogeochemical Ocean Processes", Eds., G.T. Evans and M.J.R. Fasham, Springer-Verlag, pp. 295-316.

1993 Ishizaka, J., Seasonal changes of phytoplankton distributions in the Pacific detected by Coastal Zone Color Scanner. "Satellite Remote Sensing of the Oceanic Environment", Eds. I. S. F. Jones, Y. Sugimori and R.W. Stewart, Seibutsu Kenkyusha, pp. 399-407.

1993 Fukushima, H., J. Ishizaka, I. Asanuma, and M. Takagi, Northwestern Pacific Coastal Zone Color Scanner Monthly Composite (1978-1986). ISY PGO Japan, CD-ROM Publication.

1991 Ishizaka, J. and K. Ishikawa, Northwest Pacific Carbon Cycle Study (NOPACCS) - MITI. La Mer, 29, 152-154.

1989 Ishizaka, J., and E. E. Hofmann, Book review of "Nitrogen Cycling in Coastal Marine Environment". ECOMOD (News letter of International Society of Ecological Modelling) 7: 8-10.